Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924755.1_cds_XP_016473053.1_65223
CDS Infomation

[gene=LOC107795010] [db_xref=GeneID:107795010] [protein=DNA polymerase eta] [protein_id=XP_016473053.1] [location=complement(join(150..280,373..481,2210..2425,2533..2646,2862..2985,4610..4729,4982..5085,5222..5386,5837..6001,6082..6193,6298..6418,7004..7079))] [gbkey=CDS]
Sequence

ATGCCGGTGGCAAGGCCTGAGTCATCGGATTCTAGAGTTATTGCTCATGTCGACATGGAT
TGCTTCTATGTTCAAGTGGAGCAGCGAAAGCAACCAAGTCTAAGAGGTCAACCCGCTGCT
GTTGTGCAGTACAATTCTTGGCAAGGTGGGGGGCTGATCGCCGTCAGTTATGAGGCTCGT
AAATTTGGGGTGAAGCGCTCAATGCGAGGTGATGAAGCAAAGCAAGTTTGTCCGGAGATT
CATCTTGTTCAAGTCCCAGTTGCCCGTGGTAAAGCTGACCTAAATTCTTACAGGAATGCA
GGCTCAGAGGTTGTCGCCATACTTTCAAGAAGAGGCCGATGTGAGCGTGCTTCAATTGAT
GAAGTGTATTTGGATCTCACTATAGCTGCTGAAGCAATGTTGGCAAATAATCCTCCTGAG
TGCCTGGACACGATCAGTGAAGAAGCAGTGAAATCACATGTTTTGGGTCTTGAGGTTGGT
AGCGATCCCGGAGAGAATGTCAGACATTGGCTCACTAGAAGTGACGCTAGTCGCCGTGAT
AAGTTGTTAGCCTGTGGAGCCCTTATTGTTGCAGAACTTCGGCTGCAAGTATTAGAAGAG
ACTGAGTTCACTTGTTCTGCAGGCATTGCTCATAATAAGATGCTGGCCAAACTAGCAAGT
GGAATGAATAAACCTGCTCAGCAAACTGTGGTGCCTTCCTCATCCGTCAGCAAATTACTT
GAAACTTTGCCTATAAAGAAAATGAAACAGCTTGGAGGAAAACTTGGAACTTCTTTGCAA
ATTGACTTAGGTGTGAACACTGTTGGGGATCTGCTCCAGTTTTCAGAAGAGAAGCTACAA
GAGTATTATGGAATAAATACTGGTTCCTGGTTATGTAATACAGCAAGGGGCATTAGTGGG
GAAGAGGTCAAGGAACGCCTTCTTCCCAACAGTCATGGTTCGGGAAAGACATTCCCTGGA
CCTCGAGCTCTTAAAACTGTTGCTTCTGTTGAAAAGTGGCTCAGTGAACTCTGCGAAGAA
CTTAGTGAACGTCTTCAGTCTGATCTAGAACAGAATAAGCGGATTGCACATACTCTTACT
CTACATGCTCAAGCACACAAGTCAAATGACGCAGATTCGTTTAAGAAATTTCCATCAAAG
TCATGTCCACTAAGGTATGGGACTGCCAAGATTAAGGAAGATGCCCTCAGCCTGTTTCAA
GCAGGATTGCGTGAATATCTTGGCCAGTACAATGTGAAGACTTCAGGAAATCAAAACTGT
GGGTGGGGAATAACTGGTCTTTCTGTTTCAGCCAGTAAAATAGTAGCCATACCATCTGGT
ACACGGTCTATCATGAATTATTTTCAAAACCTAGAGGAAATTTACCCTCAAGTAAAACTA
TCCAGCGAAAAGCTTATCCAAGATGCTCCACTTTTGTCACCTTCAGAGAACTGTCTAAGA
AGTGGAGGTCATCCAACTTTGCAGTCAACAGAACGAATAGCTCGACATGAGGAAGATAAA
GAGACTAAACATTCCATAGAGGAAGAGGACAAGGAGATGTTCAAAGAAAAGGTTTGA

Peptide Sequence

PEP ID

XP_016473053.1
PEP Infomation

PREDICTED: DNA polymerase eta [Nicotiana tabacum]
Sequence

MPVARPESSDSRVIAHVDMDCFYVQVEQRKQPSLRGQPAAVVQYNSWQGGGLIAVSYEAR
KFGVKRSMRGDEAKQVCPEIHLVQVPVARGKADLNSYRNAGSEVVAILSRRGRCERASID
EVYLDLTIAAEAMLANNPPECLDTISEEAVKSHVLGLEVGSDPGENVRHWLTRSDASRRD
KLLACGALIVAELRLQVLEETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPSSSVSKLL
ETLPIKKMKQLGGKLGTSLQIDLGVNTVGDLLQFSEEKLQEYYGINTGSWLCNTARGISG
EEVKERLLPNSHGSGKTFPGPRALKTVASVEKWLSELCEELSERLQSDLEQNKRIAHTLT
LHAQAHKSNDADSFKKFPSKSCPLRYGTAKIKEDALSLFQAGLREYLGQYNVKTSGNQNC
GWGITGLSVSASKIVAIPSGTRSIMNYFQNLEEIYPQVKLSSEKLIQDAPLLSPSENCLR
SGGHPTLQSTERIARHEEDKETKHSIEEEDKEMFKEKV

Transcript Sequence

Gene sequence data has not been registered.